A hybrid parameter-tuning for adaptive variable-length particle swarm optimisation in cancer feature selection

Main Article Content

Shir Li WANG

shirli_wang@meta.upsi.edu.my

https://orcid.org/0000-0003-4417-3213
Siti RAMADHANI

siti.ramadhani@uin-suska.ac.id

https://orcid.org/0000-0002-2453-6331
Muhammad FIKRY

Muhammad.fikry@uin-suska.ac.id

https://orcid.org/0000-0002-2505-3091
Haldi BUDIMAN

haldibudiman@uniska-bjm.ac

https://orcid.org/0000-0003-4369-4922
Theam Foo NG

tfng@usm.my

https://orcid.org/0000-0002-9529-4456
Sumayyah DZULKIFLY

sumayyah.dzul@meta.upsi.edu.my

https://orcid.org/0000-0001-8371-8891
Roziana ARIFFIN

roziana.ariffin@gmail.com

https://orcid.org/0000-0002-1161-8047

Abstract

High-dimensional gene expression data pose substantial challenges for cancer classification due to extreme dimensionality, feature redundancy, and limited sample availability. Conventional Variable-Length PSO with Local Search (VLPSO-LS) relies on static acceleration coefficients and predefined inertia-weight schedules, which may limit adaptive search behaviour and increase the risk of premature convergence. To address these limitations, this study proposes a novel Variable-Length Adaptive Particle Swarm Optimisation with Local Search (VL-APSO-LS) framework. The proposed method incorporates a dynamic particle representation, adaptive inertia weight and acceleration control, and a comprehensive velocity update mechanism to enhance diversification and exploitation within a variable-length optimisation structure. The framework was evaluated on five benchmark microarray datasets (Leukaemia, SRBCT, Colon, Lymphoma, and Lung cancer) using four widely adopted classifiers. Experimental results demonstrate that VL-APSO-LS consistently improves predictive performance and feature-selection efficiency relative to VLPSO-LS and other PSO-based variants. The strong-balance performance configuration (Scheme 2) achieves an average classification accuracy of 94.39%, outperforming the baseline of 92.64%. Furthermore, it achieves the highest Accuracy-to-Feature Ratio (0.3775 vs 0.3369), indicating a superior balance between accuracy and feature compactness. Notably, the proposed method achieves perfect classification accuracy (100%) on the Leukaemia dataset and reduces the selected features in the Colon dataset to only 86, compared with over 700 features in competing approaches. Statistical validation confirms consistent non-inferiority and frequent superiority across dataset-classifier combinations, particularly when integrated with Support Vector Machine (SVM). Overall, VL-APSO-LS provides a robust, adaptive, and statistically validated optimisation framework for high-dimensional biomedical classification.

Keywords:

adaptive particle swarm optimisation, variable-length feature selection, gene expression data, microarray data, cancer classification

Sustainable Development Goal (SDG)

  • Good health and well-being

References

Article Details

WANG, S. L., RAMADHANI, S., FIKRY, M., BUDIMAN, H., NG, T. F., DZULKIFLY, S., & ARIFFIN, R. (2026). A hybrid parameter-tuning for adaptive variable-length particle swarm optimisation in cancer feature selection. Applied Computer Science, 22(3), 121-147. https://doi.org/10.35784/acs_9376